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What kind of distortion correction options are available in fMRIprep?

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Dianne K PattersonJUL 19, 2023, 11:30:42 AM

See SDC. fMRIprep offers four techniques: Pepolar; Direct B0 mapping sequences;
Phase-difference B0 estimation; and Fieldmap-less estimation (experimental).

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What do you need to do to the subject files to ensure distortion correction gets run?

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  • A.

    One option is to make sure the IntendedFor field has been added to the appropriate field map JSON file.

  • B.

    Just add the appropriate flag to the fMRIprep command.

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